{"id":1024,"date":"2021-06-29T16:07:51","date_gmt":"2021-06-29T16:07:51","guid":{"rendered":"https:\/\/faculty.engineering.ucdavis.edu\/hung-new\/?page_id=1024"},"modified":"2026-04-05T01:49:47","modified_gmt":"2026-04-05T08:49:47","slug":"refereed-journal-publications","status":"publish","type":"page","link":"https:\/\/faculty.engineering.ucdavis.edu\/hung\/publications\/refereed-journal-publications\/","title":{"rendered":"Refereed Journal Articles"},"content":{"rendered":"\t\t
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\n\t\t\t\t\t\t\t\t\n\t\t\t\tRefereed Journal Articles \n\t\t\t<\/h2 > \n\t\t\t\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t
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(See Google Scholar citation profile<\/a> for all the citation information)<\/p>

Aquaculture\/Aquacultural Engineering\/Recirculating Systems
<\/strong><\/h3>

AERS-22.<\/strong> Rahman MM, Wayman WR, Eads AR, Santos A, Hopkins W, Kearny VM, Dunham KS, Hung TC<\/strong>, Linares-Casenave J (2026) Fertilization capacity evaluation of cryopreserved delta smelt (Hypomesus transpacificus) sperm, North American Journal of Aquaculture<\/em>, accepted.
AERS-21.<\/strong> Rahman MM, Chen SH, Fangue NA, Lewis LS, Hung TC*<\/strong> (2026) Retention rate and biological effects of Floy and FRyID tags on juvenile longfin smelt (Spirinchus thaleichthys)<\/a>, Fisheries Research<\/em> 296, 107689.
AERS-20.<\/strong>\u00a0Thakur AK, Ferguson A, Ahamed MS, Miao Z, Attia ME, Hung TC<\/strong>, Fath H, Kassem AS, Jailany AT, Eldin AZ (2025) Toward resource-intelligent greenhouses: A prospective vision for drylands<\/a>, Results in Engineering<\/em> 28, 107035.
AERS-19.<\/strong>\u00a0Tseng YM, Chen SH, Rahman MM, Hung TC*<\/strong> (2025) Ramshorn Snail (Helisoma anceps) shows a preference for consuming non-viable fish eggs over the live ones<\/a>, Journal of Applied Aquaculture<\/em> 38(1), 45\u201357.
AERS-18.<\/strong> Tsai YJJ, Ellison L, Stevenson T, Hung TC*<\/strong> (2025) Injury and mortality assessment of pumping on a small, sensitive fish species<\/a>, North American Journal of Aquaculture<\/em> 87(4), 317-324.
AERS-17.<\/strong> Rahman MM, Hung TC*<\/strong> (2025) Age and repeated collection interval effects on sperm motility in the endangered delta smelt (Hypomesus transpacificus)<\/a>, Endangered Species Research<\/em>\u00a057, 211-220.
AERS-16.<\/strong> Long CM, Tsai YJJ, Castillo G, Hung TC<\/strong>, Tobias VD, Carson EW (2024) Evaluation of visible implant elastomer (VIE) tags for use in supplementation of an endangered estuarine fish<\/a>, North American <\/em>Journal of Fisheries Management<\/em> 44(5), 962-972.
AERS-15.<\/strong> Tsai YJJ, Ellison L, Stevenson T, Carson EW, Hung TC*<\/strong> (2023) No effect of stocking density on the survival or size of late-stage delta smelt larvae reared in a small-scale culture system<\/a>, North American Journal of Aquaculture<\/em> 85(4), 395-400.
AERS-14.<\/strong> Putri FE, Lieth JH, Hung TC*<\/strong> (2023) Optimization of citrus nursery production in soilless culture under controlled environment<\/a>, Technology in Horticulture<\/em> 3, 13.
AERS-13.<\/strong> Afentoulis V*, Kalmbach A, Hung TC*<\/strong>, Rahman MM, Ellison L, Miranda J (2022) Vital dye immersion evaluations with juvenile delta smelt<\/a>, Aquaculture, Fish and Fisheries<\/em> 3(1), 102-111.
AERS-12.<\/strong> Rahman MM, Asadi Aghbolaghi M, Hung TC*<\/strong> (2022) Evaluate effects of the dilution medium and holding time on various motility parameters of delta smelt semen<\/a>, Theriogenology<\/em> 197, 301-309.
AERS-11.<\/strong> Mulvaney W, Rahman MM, Lewis LS, Cheng J, Hung TC<\/strong>* (2022) Captive rearing of longfin smelt Spirinchus Thaleichthys: First attempt of weaning cultured juveniles to dry feed<\/a>, Animals<\/em> 12, 1478.
AERS-10.<\/strong> Tsai YJJ, Ellison L, Stevenson T, Mulvaney WJ, Carson EW, Hung TC*<\/strong> (2022) Evaluating the performance of a small-scale culture system for delta smelt (Hypomesus transpacificus)<\/a>, North American Journal of Aquaculture<\/em> 84(3), 370-380.
AERS-9.<\/strong> Hung TC*<\/strong>, Ellison L, Stevenson T, Sandford M, Schultz AA, Eads AR (2022) Early weaning in endangered Delta Smelt: effect of weaning time on growth and survival<\/a>, North American Journal of Aquaculture<\/em> 84, 249-260.
AERS-8.<\/strong> Tsai YJJ, Chase SN, Hung TC*<\/strong> (2021) Validating the use of sodium hypochlorite for egg detachment and photograph-based egg counting in Delta Smelt<\/a>, Aquaculture Research<\/em> 52, 5936-5940.
<\/strong>AERS-7.<\/strong> Putri FE, Hung TC*<\/strong> (2020) Comparison of nutrient removal and biomass production between macrophytes and microalgae for treating artificial citrus nursery wastewater<\/a>, Journal of Environmental Management<\/em> 264, 110303.
AERS-6. <\/strong>Sandford M, Castillo G, Hung TC*<\/strong> (2020) A review of fish identification methods applied on small fishes<\/a>, Reviews in Aquaculture <\/em>12(2), 542-554.
AERS-5.<\/strong> Castillo GC, Sandford ME, Hung TC<\/strong>, Yang WR, Tigan G, Ellison L, Lindberg JC, Van Nieuwenhuyse EE (2019) Evaluation of chromatophores as natural marks for delta smelt: the effects of life-stage and light intensity<\/a>, Environmental Biology of Fishes<\/em> 102(9), 1137-1147.
AERS-4.<\/strong> Castillo GC, Sandford ME, Hung TC<\/strong>, Tigan G, Lindberg JC, Yang WR, Nieuwenhuyse EE (2018) Using natural marks to identify individual cultured adult Delta Smelt<\/a>, North American Journal of Fisheries Management<\/em> 38(3), 698-705.
AERS-3.<\/strong> Hung T<\/strong>C*<\/strong>, Stevenson T, Sandford M, Gheremariam T (2018) Temperature, density and ammonia effects on growth and fecundity of the ramshorn snail (Helisoma anceps)<\/a>, Aquaculture Research<\/em> 49(2), 1072\u20131079.
AERS-2.<\/strong> Wilder RM, Hassrick JL, Grimaldo LF, Greenwood MFD, Acu\u00f1a S, Burns JM, Maniscalco DM, Crain PK, Hung TC<\/strong> (2016) Feasibility of passive integrated transponder and acoustic tagging for endangered adult Delta Smelt<\/a>, North American Journal of Fisheries Management<\/em> 36, 1167-1177.
AERS-1.<\/strong> Hung TC<\/strong>, Piedrahita RH (2011) The performance and impact of a bubble-wash bead filter in a recirculating green water larval culture system for delta smelt (Hypomesus transpacificus)<\/a>, Aquacultural Engineering<\/em> 45, 60-65.<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t

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Delta Smelt (Hypomesus transpacificus<\/em>)<\/h3>

DS-38.<\/strong> Griffiths JS, Finger AJ, Baerwald MR, Rahman MM, Hung TC<\/strong>, Fangue NA, Whitehead A (2026) Highly and lowly domesticated endangered fish from a conservation hatchery diverge in their thermal physiology, transcriptome, and methylome<\/a>, Evolutionary Applications<\/em> 19(3), e70220.
DS-37.<\/strong> Lewis LS, Denney CT, Cavole LM, Lama AW, Chung CY, Zhao F, Hobbs JA, Willmes M, Hung TC<\/strong>, Glessner JJ, Teh S, Hammock BG (2025) Otolith-based comparisons of wild versus hatchery-origin delta smelt<\/a>, Endangered Species Research<\/em> 57, 467-480.
DS-36.<\/strong> Lewis L, Willmes M, Denney C, Cavole L, Xieu W, Fichman RA, Hung TC<\/strong>, Ellison L, Stevenson T, Schultz A, Hammock B, Teh S, Hobbs J (2025) Validating estuarine movements from otoliths for an imperiled fish<\/a>, Aquatic Biology <\/em>34, 1-13.
DS-35.<\/strong> Patel A, Hung TC<\/strong>, Rossner KF (2024) Understanding the driving forces of Bay\/Delta administrative agency officials towards the Delta Smelt Resiliency Strategy: Outflow augmentation<\/a>, Journal of Student Research<\/em> 13(3).
DS-34.<\/strong> Davis BE, Hammock BG, Kwan N, Pien C, Bell H, Hartman R, Baerwald MR, Schreier B, Gille D,\u00a0 Acu\u00f1a S, Teh S, Hung TC<\/strong>, Ellison L, Cocherell DE, Fangue NA (2024) Insights from a year of field deployments inform the conservation of an endangered estuarine fish<\/a>, Conservation <\/em>Physiology 12(1), coae088.
DS-33.<\/strong> Rahman MM, Hung TC*<\/strong> (2024) Impact of salinity and body size on sperm motility in three California smelt species<\/a>, Aquaculture Reports<\/em> 39, 102503.
DS-32.<\/strong> Habibi E, Miller MR, Schreier A, Campbell MA, Hung TC<\/strong>, Gille D, Baerwald M, Finger AJ (2024) Single generation epigenetic change in captivity and reinforcement in subsequent generations in a delta smelt (Hypomesus transpacificus) conservation hatchery<\/a>, Molecular Ecology<\/em> 33(15), e17449.
DS-31.<\/strong> Chase SN, Davis BE, Carson EW, Ellison L, Finger AJ, Baerwald MR, Hung TC*<\/strong> (2024) Evaluating the impact of captive ancestry on the growth and survival of Delta Smelt in a captive environment<\/a>, Aquaculture Reports<\/em> 36, 102169.
DS-30.<\/strong> Asadi Aghbolaghi M, Maloy AP, Coombs JA, Hung TC*<\/strong>, Carson EW (2024) Phylogenetic relationships and introduction history inferred from complete mitochondrial genomes of four smelts (Osmeridae) of the modern San Francisco Estuary<\/a>, Zoologischer Anzeiger<\/em> 308, 66-70.
DS-29.<\/strong> LaCava M, Griffiths J, Ellison L, Carson E, Hung TC<\/strong>, Finger A (2023) Loss of plasticity in maturation timing after ten years of captive spawning in a delta smelt conservation hatchery<\/a>, Evolutionary Applications<\/em> 16(11), 1845-1857.
DS-28.<\/strong> LaCava MEF, Donohue IM, Badger ME, Hung TC<\/strong>, Ellison L, Rahman MM, Kelvas K, Finger AJ, Carson EW (2024) Assessing captive spawning strategies for supplementation production of delta smelt (Hypomesus transpacificus)<\/a>, Transactions of the American Fisheries Society<\/em> 153(1), 129-138.
DS-27.<\/strong> Dhayalan T, Tran F, Hung TC<\/strong>, Senegal T, Mora V, Lewis L, Teh S, Hammock BG (2024) Liver glycogen as a sensitive indicator of food limitation in delta smelt<\/a>, Estuaries and Coasts<\/em>. 47, 504-518.
DS-26.<\/strong> Chase SN, Tsai YJJ, Croshaw M, Hung TC*<\/strong> (2023) Salinity and diel timing affect group structure in delta smelt<\/a>, Aquaculture, Fish and Fisheries<\/em> 3(5), 407-414.
DS-25.<\/strong> Ellison L, Rahman MM, Finger AJ, Sandford M, Hsueh CH, Schultz AA, Hung TC*<\/strong> (2023) Size, fecundity, and condition factor changes in endangered delta smelt Hypomesus transpacificus over 10 generations in captivity<\/a>, Aquaculture, Fish and Fisheries<\/em> 3(4), 353-365.
DS-24.<\/strong> Baerwald MR, Kwan N, Pien C, Auringer G, Carson EW, Cocherell DE, Ellison L, Fangue NA, Finger AJ, Gille DA, Hudson H, Hung TC<\/strong>, Sommer T, Stevenson T, Schreier BM (2023) Captive-reared delta smelt (Hypomesus transpacificus) exhibit high survival in natural conditions using in situ enclosures<\/a>, PLoS ONE<\/em> 18(5), e0286027.
DS-23.<\/strong> Pasparakis C, Lohroff T, Biefel F, Cocherell DE, Carson EW, Hung TC<\/strong>, Connon RE, Fangue NA, Todgham AE (2023) Effects of turbidity, temperature, and predation cue on the stress response of juvenile delta smelt<\/a>, Conservation Physiology<\/em> 11(1), coad036.
DS-22.<\/strong> Tsai YJJ, Chase SN, Carson EW, Zweig L, Hung TC*<\/strong> (2023) A qualitative comparison of spawning behavior between cultured and wild delta smelt (Hypomesus transpacificus)<\/a>, San Francisco Estuary and Watershed Science<\/em> 21(3), article 2.
DS-21.<\/strong> Lewis LS, Huang JL, Willmes M, Fichman RA, Hung TC<\/strong>, Ellison LT, Stevenson TA, Teh S, Hammock BG, Schultz AA, Grimsich J, Huyskens MH, Yin QZ, Cavole LM, Botto N, Hobbs JA (2022) Visual, spectral, and microchemical quantification of crystalline anomalies in otoliths of wild and cultured delta smelt<\/a>, Scientific Reports<\/em> 12, 20751.
DS-20.<\/strong> Hung TC*<\/strong>, Hammock BG, Sandford M, Stillway M, Park M, Lindberg JC, Teh SJ (2022) Temperature and salinity preferences of endangered Delta Smelt (Hypomesus transpacificus, Actinopterygii, Osmeridae)<\/a>, Scientific Reports<\/em> 12, 16558.
DS-19.<\/strong> Pasparakis C, Wampler AN, Lohroff T, DeCastro F, Cocherell DE, Carson EW, Hung TC<\/strong>, Connon RE, Fangue NA, Todgham AE (2022) Characterizing the stress response in juvenile delta smelt exposed to multiple stressors<\/a>, Comparative Biochemistry and Physiology, Part A<\/em> 274, 111303.
DS-18.<\/strong> Kurobe T, Hammock BG, Damon LJ, Hung TC<\/strong>, Acu\u00f1a S, Schultz AA, Teh SJ (2022) Reproductive strategy of delta smelt Hypomesus transpacificus and impacts of drought on reproductive performance<\/a>, PLoS ONE<\/em> 17(3), e0264731.
DS-17.<\/strong> Tsai YJJ, Chase SN, Carson EW, Zweig L, Hung TC*<\/strong> (2022) Delta smelt <\/span>(Hypomesus transpacificus) exhibit wide variation in spawning behavior: an<\/span> investigation of substrate type, diel timing, and participants<\/span><\/a>, Estuaries and <\/span><\/em>Coasts<\/span><\/em> 45, 1480-1489.
DS-16.<\/strong> Xieu W, Lewis LS, Zhao F, Fichman RA, Willmes M, Hung TC<\/strong>, Ellison L, Stevenson T, Tigan G, Schultz A, Hobbs J (2021) Experimental validation of otolith-based age and growth reconstructions across multiple life stages of a critically endangered estuarine fish<\/a>, PeerJ<\/em> 9, e12280<\/span>.
DS-15.<\/strong> Bork K, Moyle P, Durand J, Hung TC<\/strong>, Rypel AL (2021) Revisiting the delta smelt: A rebuttal to Weiland and Murphy<\/a>, Environmental Law Reporter<\/em> 51(9), ELR 10740.
DS-14. <\/strong>Tsai YJJ, Chase S, Carson EW, Zweig L, Hung TC*<\/strong> (2021) Characterization of spawning behavior in cultured delta smelt<\/a>, North American Journal of Aquaculture<\/em> 83, 51-57.
DS-13. <\/strong>Hammock BG, Ram\u00edrez-Duarte WF, Triana-Garc\u00eda PA, Schultz AA, Avendano LI, Hung TC<\/strong>, White JR, Bong YT, Teh SJ (2020) The health and condition responses of delta smelt to fasting: A time series experiment<\/a>, PLoS ONE<\/em> 15(9), e0239358.
DS-12. <\/strong>Bork K, Moyle P, Durand J, Hung TC<\/strong>, Rypel AL (2020) Small populations in jeopardy: A delta smelt case study<\/a>, Environmental Law Reporter<\/em> 50(9), ELR 10714.
DS-11.<\/strong> Tigan G, Mulvaney W, Ellison L, Schultz A, Hung TC*<\/strong> (2020) Effects of light and turbidity on feeding, growth, and survival of larval Delta Smelt (Hypomesus transpacificus<\/em>, Actinopterygii, Osmeridae)<\/a>, Hydrobiologia<\/em> 847(13), 2883-2894.
DS-10. <\/strong>Lindberg JC, Tsai YJJ, Kammerer BD, Baskerville-Bridges B, Hung TC*<\/strong> (2020) Spawning microhabitat selection in wild-caught delta smelt Hypomesus transpacificus under laboratory conditions<\/a>, Estuaries and Coasts<\/em> 43(1), 174-181.
DS-9. <\/strong>Hung TC*<\/strong>, Rosales M, Kurobe T, Stevenson T, Ellison L, Tigan G, Sandford M, Lam C, Schultz A, Teh S (2019) A pilot study of the performance of captive-reared delta smelt Hypomesus transpacificus in a semi-natural environment<\/a>, Journal of Fish Biology<\/em> 95(6), 1517-1522.
DS-8. <\/strong>Romney ALT, Yanagitsuru YR, Mundy PC, Fangue NA, Hung TC<\/strong>, Brander SM, Connon RE (2019) Developmental staging and salinity tolerance in embryos of the delta smelt, Hypomesus transpacificus<\/a>, Aquaculture<\/em> 511, 634191.
DS-7. <\/strong>Willmes M, Lewis LS, Davis BE, Loiselle L, James HF, Denny C, Baxter R, Conrad JL, Fangue NA, Hung TC<\/strong>, Armstrong RA, Williams IS, Holden P, Hobbs JA (2019) Calibrating temperature reconstructions from fish otolith oxygen isotope analysis for California\u2019s critically-endangered delta smelt<\/a>, Rapid Communications in Mass Spectrometry<\/em> 33(14), 1207-1220.
DS-6. <\/strong>Davis BE, Cocherell D, Sommer T, Baxter R, Hung TC<\/strong>, Todgham AE, Fangue NA (2019) Sensitivities of an endemic, endangered California smelt and two non-native fishes to serial increases in temperature and salinity: Implications for shifting community structure with climate change<\/a>, Conservation Physiology<\/em> 7(1), coy076.
DS-5.<\/strong> Lessard J, Cavallo B, Anders P, Sommer T, Schreier B, Gille D, Schreier A, Finger A, Hung TC<\/strong>, Hobbs J, May B, Schultz A, Burgess O, Clarke R (2018) Considerations for the use of captive-reared delta smelt for species recovery and research<\/a>, San Francisco Estuary and Watershed Science<\/em> 16(3), article 3.
DS-4.<\/strong> Finger AJ, Mahardja B, Fisch KM, Benjamin A, Lindberg J, Ellison L, Ghebremariam T, Hung TC<\/strong>, May B (2018) A managed conservation hatchery for delta smelt shows evidence of genetic adaptation to captivity after 9 generations<\/a>, Journal of Heredity<\/em> 109(6), 689-699.
DS-3.<\/strong> Benjamin A, Saglam IK, Mahardja B, Hobbs J, Hung TC<\/strong>, Finger AJ (2018) Use of single nucleotide polymorphisms identifies backcrossing and species misidentifications among three San Francisco Estuary osmerids<\/a>, Conservation Genetics<\/em> 19(3), 701-712.
DS-2.<\/strong> Kammerer BD, Hung TC<\/strong>, Baxter R, Teh SJ (2016) Physiological effects of salinity on delta smelt, Hypomesus transpacificus<\/a>, Fish Physiology and Biochemistry<\/em> 42, 219-232.
DS-1.<\/strong> Hung TC*<\/strong>, Eder KJ, Alireza J, Loge FJ (2014) Decline in feeding activity of female cultured delta smelt prior to spawning<\/a>, North American Journal of Aquaculture<\/em> 76, 159-163.<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t

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Longfin Smelt (Spirinchus thaleichthys<\/span><\/em>)<\/h3>

LFS-8.<\/strong>\u00a0Asadi Aghbolaghi M, Rahman MM, Lewis LS, Hung TC* <\/strong>(2025) Morphometric variation and sexual dimorphism of endangered Longfin Smelt (Spirinchus thaleichthys) in the San Francisco Estuary<\/a>, Endangered Species Research<\/em> 59, esr01471.
LFS-7.<\/strong> Pasparakis C, Biefel F, DeCastro F, Wampler A, Cocherell DE, Carson EW, Hung TC<\/strong>, Connon RE, Fangue NA, Todgham AE (2024) Physiological response of longfin smelt to changing temperatures and turbidities<\/a>, Conservation Physiology<\/em> 12(1), coae081.
LFS-6. <\/strong>Biefel F, Pasparakis C, Cocherell DE, Hung TC<\/strong>, Carson EW, Fangue NA, Geist JP, Todgham AE, Connon RE (2024) Turbidity and temperature effects on growth and gene transcription of threatened juvenile longfin smelt (Spirinchus thaleichthys)<\/a>, Aquaculture<\/em> 593, 741296.
LFS-5. <\/strong>Yanagitsuru YR, Mauduit F, Lundquist AJ, Lewis LS, Hobbs JA, Hung TC<\/strong>, Connon RE, Fangue NA (2024) Effects of incubation temperature on the upper thermal tolerance of the imperiled longfin smelt (Spirinchus thaleichthys)<\/a>, Conservation Physiology<\/em> 12(1), coae004.
LFS-4. Hung TC*<\/strong>, Rahman MM, Lewis LS, Yang YC, Stevenson TA, Menard KL, Connon RE, Bell H, Fangue NA (2024) Laboratory-bred longfin smelt produced offspring in the first year in captivity<\/a>, North American Journal of Aquaculture<\/em> 86(2), 228-233.
LFS-3.<\/strong> Rahman MM, Lewis LS, Fangue NA, Connon RE, Hung TC*<\/strong> (2023) Effects of salinity on fertilization, hatching, and larval performance of longfin smelt Spirinchus thaleichthys<\/a>, Aquaculture Research<\/em> 2023, 9984382.
LFS-2.<\/strong> Yanagitsuru YR, Daza IY, Lewis LS, Hobbs JA, Hung TC<\/strong>, Connon RE, Fangue NA (2022) Growth, osmoregulation, and ionoregulation of longfin smelt (Spirinchus thaleichthys) yolk-sac larvae at different salinities<\/a>, Conservation Physiology<\/em> 10(1), coac041.
LFS-1.<\/strong> Yanagitsuru YR, Main MA, Lewis LS, Hobbs JA, Hung TC<\/strong>, Connon RE, Fangue NA (2021) Effects of temperature on hatching and growth performance of embryos and yolk-sac larvae of a threatened estuarine fish: longfin smelt (Spirinchus thaleichthys)<\/a>, Aquaculture<\/em> 537, 736502.<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t

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Computational Fluid Dynamics<\/h3>

CFD-3.<\/strong> Hung TC<\/strong>, Piedrahita RH (2014) Experimental validation of a novel bio-inspired particle separator<\/a>, Aquacultural <\/em>Engineering<\/em> 58, 11-19.
CFD-2.<\/strong> Hung TC<\/strong>, Piedrahita RH, Cheer A (2012) Bio-inspired particle separator design based on the food retention mechanism by suspension-feeding fish<\/a>, Bioinspiration & Biomimetics<\/em> 7, 046003.
CFD-1.<\/strong> Cheer A, Cheung S, Hung TC<\/strong>, Piedrahita RH, Sanderson SL (2012) Computational fluid dynamics of fish gill rakers during crossflow filtration<\/a>, Bulletin of Mathematical Biology<\/em> 74, 981-1000.<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t

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Toxicology<\/h3>

TOX-23. <\/strong>Luan N, Liao Z, Hung TC<\/strong>, Wu Q, Liu H, Liu X, Li G (2026) Intestinal serotonin signaling suppression: a novel mechanism for overfeeding exacerbation by nanoplastics and MC-LR in zebrafish<\/a>, Environmental Pollution<\/em> 398, 128015.
TOX-22. <\/strong>Luan N, Yang Q, Sang W, Liao Z, Hung TC<\/strong>, Zuo J, Liu H, Liu X, Chen J, Wu Q, Li G (2025) Alleviating effects of Lactobacillus rhamnosus on microcystin-LR-induced hepatotoxicity in zebrafish through regulation of intestinal metabolism: insights into the gut-liver axis and hypothalamic-pituitary-thyroid axis<\/a>, Journal of Environmental Sciences<\/em>, accepted.
TOX-21. <\/strong>Liu H, Sang W, Liao Z, Zuo J, Luan N, Liu X, Chen J, Yang Q, Hung TC<\/strong>, Wu Q, Li G (2025) Transcriptome reveals probiotics mitigating MCLR-induced reproductive toxicity in male zebrafish: Regulation of reproductive endocrine, oxidative stress, and inflammatory response<\/a>, Journal of Environmental Sciences<\/em>, accepted
TOX-20. <\/strong>Luan N, Yang Q, Liu M, Deng P, Hung TC<\/strong>, Wu Q, Zou J, Liu H, Li G (2024) Probiotic Lactobacillus rhamnosus alleviates microcystin-LR induced visual system defects and dysfunction in zebrafish by modulating apoptosis, retinal inflammation, and phototransduction<\/a>, Journal of Environmental Sciences<\/em> 157, 314-329.
TOX-19. <\/strong>Liu H, Yang Q, Li G, Hung TC<\/strong>, Zuo J, Luan N, Liu X, Wu Q (2024) Probiotic Lactobacillus rhamnosus modulates MCLR-induced oogenesis disorders in zebrafish: evidence from the transcriptome<\/a>, Science of the Total Environment<\/em> 951, 175532.
TOX-18. <\/strong>Stillway ME, Hammock BG, Acu\u00f1a S, McCormick AR, Hung TC<\/strong>, Schultz AA, Young TM, Teh SJ (2024) Sub-lethal responses of delta smelt to contaminants under different flow conditions<\/a>, San Francisco Estuary and Watershed Science<\/em> 22(2), article 5.
TOX-17. <\/strong>Luan N, Zuo J, Niu Q, Yan W, Hung TC<\/strong>, Liu H, Wu Q, Wang G, Deng P, Ma X, Qin J, Li G (2023) Probiotic Lactobacillus rhamnosus alleviates the neurotoxicity of microcystin-LR in zebrafish (Danio rerio) through the gut-brain axis<\/a>, Science of the Total Environment<\/em> 908, 168058.
TOX-16.\u00a0<\/strong>Mauduit F, Segarra A, Sherman JR, Hladik M, Wong L, Young T, Lewis LS, Hung TC<\/strong>, Fangue NA, Connon RE (2023) Bifenthrin, a ubiquitous contaminant, impairs the development and behavior of the threatened longfin smelt during early life stages<\/a>, Environmental Science & Technology<\/em> 57(26), 9580-9591.
TOX-15. <\/strong>Lin W, Luo H, Wu J, Hung TC<\/strong>, Cao B, Liu X, Yang J, Yang P (2022) A review of the emerging risks of acute ammonia nitrogen toxicity on aquatic decapod crustaceans<\/a>, Water<\/em> 15(1), 27.
TOX-14.\u00a0<\/strong>Nie H, Pan M, Chen J, Yang Q, Hung TC<\/strong>, Xing D, Peng M, Peng X, Li G, Yan W (2022) Titanium dioxide nanoparticles decreases bioaccumulation of azoxystrobin in zebrafish larvae leading to the alleviation of cardiotoxicity<\/a>, Chemosphere<\/em> 307(3), 135977.
TOX-13. <\/strong>Lin W, Luo H, Wu J, Liu X, Cao B, Hung TC<\/strong>, Liu Y, Chen Z, Yang P (2022) Distinct vulnerability to oxidative stress determines the ammonia sensitivity of crayfish (Procambarus clarkii) at different developmental stages<\/a>, Ecotoxicology and Environmental Safety<\/em> 242, 113895.
TOX-12. <\/strong>Ling X, Zuo J, Pan M, Nie H, Shen J, Yang Q, Hung TC<\/strong>, Li G (2022) The presence of polystyrene nanoplastics enhances the MCLR uptake in zebrafish leading to the exacerbation of oxidative liver damage<\/a>, Science of the Total Environment<\/em> 818, 151749.
TOX-11. <\/strong>Lin W, Hung TC<\/strong>, Kurobe T, Wang Y, Yang P (2021) Microcystin-induced immunotoxicity in fishes: A scoping review<\/a>, Toxins<\/em> 13(11), 765.
TOX-10. <\/strong>Mundy PC, Huff Hartz KE, Fulton C, Lydy M, Brander S, Hung TC<\/strong>, Fangue N, Connon R (2021) Exposure to permethrin or chlorpyrifos causes differential dose- and time-dependent behavioral effects at early larval stages of an endangered teleost species<\/a>, Endangered Species Research<\/em> 44, 89-103.
TOX-9.<\/strong> Wu Q, Li G, Huo T, Du X, Yang Q, Hung TC<\/strong>, Yan W (2021) Mechanisms of parental co-exposure to polystyrene nanoplastics and microcystin-LR aggravated hatching inhibition of zebrafish offspring<\/a>, Science of the Total Environment<\/em> 774, 145766.
TOX-8. <\/strong>Zuo J, Huo T, Du X, Yang Q, Wu Q, Shen J, Liu C, Hung TC<\/strong>, Yan W, Li G (2021) The joint effect of parental exposure to microcystin-LR and polystyrene nanoplastics on the growth of zebrafish offspring<\/a>, Journal of Hazardous Materials<\/em> 410, 124677.
TOX-7. <\/strong>Mundy PC, Carte MF, Brander SM, Hung TC<\/strong>, Fangue N, Connon RE (2020) Bifenthrin exposure causes hyperactivity in early larval stages of an endangered fish species at concentrations that occur during their hatching season<\/a>, Aquatic Toxicology<\/em> 228, 105611.
TOX-6.<\/strong> Wu Q, Yan W, Liu C, Hung TC<\/strong>, Li G (2019) Co-exposure with titanium dioxide nanoparticles exacerbates MCLR-induced brain injury in zebrafish<\/a>, Science of the Total Environment<\/em> 693, 133540.
TOX-5.<\/strong> Jin J, Kurobe T, Ram\u00edrez-Duarte WF, Bolotaolo MB, Lam CH, Pandey PK, Hung TC<\/strong>, Stillway ME, Zweig L, Caudill J, Lin L, Teh SJ (2018) Sub-lethal effects of herbicides penoxsulam, imazamox, fluridone and glyphosate on Delta Smelt (Hypomesus transpacificus)<\/a>,\u00a0Aquatic Toxicology<\/em> 197, 79-88.
TOX-4.<\/strong> Wu Q, Yan W, Liu C, Hung TC<\/strong>, Li G (2018) Parental transfer of titanium dioxide nanoparticles aggravated MCLR-induced developmental toxicity in zebrafish offspring<\/a>, Environmental science: Nano<\/em> 5(12), 2952-2965.
TOX-3.<\/strong> Cheng H, Yan W, Wu Q, Lu J, Liu C, Hung TC<\/strong>, Li G (2018) Adverse reproductive performance in zebrafish with increased bioconcentration of microcystin-LR in the presence of titanium dioxide nanoparticles<\/a>, Environmental Science: <\/em>Nano<\/em> 5(5), 1208-1217.
TOX-2.<\/strong> Wu Q, Yan W, Cheng H, Liu C, Hung TC<\/strong>, Guo X, Li G\u00a0(2017) Parental transfer of microcystin-LR induced transgenerational effects of developmental neurotoxicity in zebrafish offspring<\/a>, Environmental Pollution <\/em>231(1), 471-478.
TOX-1.<\/strong> Cheng H, Yan W, Wu Q, Liu C, Gong X, Hung TC<\/strong>, Li G (2017) Parental exposure to microcystin-LR induced thyroid endocrine disruption in zebrafish offspring, a transgenerational toxicity<\/a>, Environmental Pollution <\/em>230, 981-988.<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t

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Microbial Fuel Cells<\/h3>

MFC-3.<\/strong> Fu CC, Hung TC<\/strong>, Wu WT, Wen TC, Su CH (2010) Current and voltage responses in instant photosynthetic microbial cells with Spirulina platensis<\/a>, Biochemical Engineering Journal <\/em>52, 175-180.
MFC-2.<\/strong> Fu CC, Hung TC<\/strong>, Chen JY, Su CH, Wu WT (2010) Hydrolysis of microalgae cell walls for production of reducing sugar and lipid extraction<\/a>, Bioresource Technology <\/em>101, 8750-8754.
MFC-1.<\/strong> Fu CC, Su CH, Hung TC<\/strong>, Hsieh CH, Suryani D, Wu WT (2009) Effects of biomass weight and light intensity on the performance of photosynthetic microbial fuel cells with Spirulina platensis<\/a>, Bioresource Technology <\/em>100, 4183-4186.<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t

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Enzyme Immobilization<\/h3>

EI-4.<\/strong> Fu CC, Hung TC<\/strong>, Su CH, Suryani D, Wu WT, Dai WC, Yeh YT (2011) Immobilization of calcium oxide onto chitosan beads as a heterogeneous catalyst for biodiesel production<\/a>, Polymer International <\/em>60, 957-962.
EI-3.<\/strong> Hung TC<\/strong>, Fu CC, Su CH, Chen JY, Wu WT, Lin YS (2011) Immobilization of cellulase onto electrospun polyacrylonitrile (PAN) nanofibrous membranes and its application of the reducing sugar production from microalgae<\/a>, Enzyme and Microbial Technology<\/em> 49, 30-37.
EI-2.<\/strong> Chiou SH, Hung TC<\/strong>, Giridhar R, Wu WT (2007) Immobilization of lipase to chitosan beads using a natural cross-linker<\/a>, Preparative Biochemistry & Biotechnology<\/em> 37, 265-275.
EI-1.<\/strong> Hung TC<\/strong>, Giridhar R, Chiou SH, Wu WT (2003) Binary immobilization of Candida Rugosa lipase on chitosan<\/a>, Journal of Molecular Catalysis B: Enzymatic<\/em> 26, 69-78.<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<\/div>\n\t\t","protected":false},"excerpt":{"rendered":"

Refereed Journal Articles (See Google Scholar citation profile for all the citation information) Aquaculture\/Aquacultural Engineering\/Recirculating Systems AERS-22. Rahman MM, Wayman WR, Eads AR, Santos A, Hopkins W, Kearny VM, Dunham KS, Hung TC, Linares-Casenave J (2026) Fertilization capacity evaluation of cryopreserved delta smelt (Hypomesus transpacificus) sperm, North American Journal of Aquaculture, accepted.AERS-21. Rahman MM, Chen […]<\/p>\n","protected":false},"author":7,"featured_media":0,"parent":36,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"inline_featured_image":false,"footnotes":""},"class_list":["post-1024","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/faculty.engineering.ucdavis.edu\/hung\/wp-json\/wp\/v2\/pages\/1024","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/faculty.engineering.ucdavis.edu\/hung\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/faculty.engineering.ucdavis.edu\/hung\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/faculty.engineering.ucdavis.edu\/hung\/wp-json\/wp\/v2\/users\/7"}],"replies":[{"embeddable":true,"href":"https:\/\/faculty.engineering.ucdavis.edu\/hung\/wp-json\/wp\/v2\/comments?post=1024"}],"version-history":[{"count":508,"href":"https:\/\/faculty.engineering.ucdavis.edu\/hung\/wp-json\/wp\/v2\/pages\/1024\/revisions"}],"predecessor-version":[{"id":3160,"href":"https:\/\/faculty.engineering.ucdavis.edu\/hung\/wp-json\/wp\/v2\/pages\/1024\/revisions\/3160"}],"up":[{"embeddable":true,"href":"https:\/\/faculty.engineering.ucdavis.edu\/hung\/wp-json\/wp\/v2\/pages\/36"}],"wp:attachment":[{"href":"https:\/\/faculty.engineering.ucdavis.edu\/hung\/wp-json\/wp\/v2\/media?parent=1024"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}