Publications

L. Saiz and J. M. G. Vilar, Protein-protein/DNA interaction networks: versatile macromolecular structures for the control of gene expression, IET Systems Biology, 2, 247-255 (2008).

L. Saiz and J. M. G. Vilar, Ab initio thermodynamic modeling of distal multisite transcription regulation, Nucleic Acids Research, 36, 726-731 (2008).

L. Saiz and J.M.G. Vilar, Multilevel deconstruction of the in vivo behavior of looped DNA-protein complexes, PLoS One, 2(4): e355. doi:10.1371/journal.pone.0000355 (2007).

J.M.G. Vilar and L. Saiz, Multiprotein DNA looping, Phys. Rev. Lett., 96: 238103 (2006).

L. Saiz and J.M.G. Vilar, DNA looping: the consequences and its control, Current Opinion in Structural Biology, 16: 344-350 (2006).

L. Saiz and J.M.G. Vilar, Stochastic dynamics of macromolecular-assembly networks, Nature/EMBO Molecular Systems Biology, 2, doi:10.1038/msb4100061 (2006).

S. Vemparala, L. Saiz, R.G. Eckenhoff, and M.L. Klein, Partitioning of anesthetics into a lipid bilayer and their interaction with membrane-bound peptide bundles, Biophys. J., 91: 2815-2825 (2006).

L. Saiz, J.M. Rubi, and J.M.G. Vilar, Inferring the in vivo looping properties of DNA, Proc. Natl. Acad. Sci. USA, 102: 17642-17645 (2005).

J.M.G. Vilar and L. Saiz, DNA looping in gene regulation: From the assembly of macromolecular complexes to the control of transcriptional noise, Current Opinion in Genetics & Development, 15: 136-144 (2005).

L. Saiz and M.L. Klein, The transmembrane domain of the acetylcholine receptor: Insights from simulations on synthetic peptide models, Biophys. J., 88: 959-970 (2005).

M. Pickholz, L. Saiz, and M.L. Klein, Concentration effects of volatile anesthetics on the properties of model membranes: A coarse-grain approach, Biophys. J., 88: 1524-2534 (2005).

L. Saiz and M.L. Klein, Computer simulation studies of model biological membranes, Acc. Chem. Res., 35: 482-489 (2002).

L. Saiz and M.L. Klein, Influence of highly polyunsaturated lipid acyl chains of biomembranes on the NMR order parameters, J. Am. Chem. Soc., 123: 7381-7387 (2001).

L. Saiz and M.L. Klein, Structural properties of a highly polyunsaturated lipid bilayer from molecular dynamics simulations, Biophys. J., 81: 204-216 (2001).

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